Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCTGTGTTGCCAGGA
.(((((((.(((..(((.....&)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153365
GeneSymbolTAPT1
Binding site1764,1780
Score0.923
Seed1
Au0.529
Energy-17.9
Binding len16
Me-6.996
Phylopstem-0.5044846042857143
Phylopflank-0.6160629811250001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure