Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGAGATCGAGGCTGCAGT
((((((((.(((((...((((&))))....))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153368
GeneSymbolGJD4
Binding site1572,1595
Score0.846
Seed1
Au0.382
Energy-22.7
Binding len23
Me-5.962
Phylopstem-0.9990912375
Phylopflank-0.2849923737500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure