Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGTTCGCGCAGGTGGGCGACCGCAGCATCATGCAAA
((((((((((((((((.....&.)))))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153372
GeneSymbolC1QTNF1
Binding site826,866
Score0.846
Seed1
Au0.382
Energy-25.3
Binding len22
Me-3.938
Phylopstem3.20153679
Phylopflank3.8290458324999994
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure