Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGATGCTGGAGCTGCGAG
((((((((.((((....((((&))))...)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153372
GeneSymbolC1QTNF1
Binding site872,893
Score0.923
Seed1
Au0.397
Energy-24.3
Binding len21
Me-6.819
Phylopstem5.3673058750000004
Phylopflank4.022073857500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure