Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGGCCCCGAAAGGGCTAACGGCAGCCGAGGCTGCGGG
((((((((.(((((((..(((&.)))....))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153376
GeneSymbolCCDC96
Binding site261,302
Score0.846
Seed1
Au0.235
Energy-24.3
Binding len25
Me-4.994
Phylopstem0.3286538375
Phylopflank-0.16425127374999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure