Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGGACACTGCTGCAGCTGG
...(((((((((((((..(((&)))..)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153378
GeneSymbolSLC22A12
Binding site840,861
Score1.0
Seed0
Au0.382
Energy-22.3
Binding len21
Me-6.515
Phylopstem0.6494726133333333
Phylopflank0.5278306424999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure