Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CAGAAAGAAACTGCCAGTGG
(((((((..(((((((......&))))))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153427
GeneSymbolPITX2
Binding site28,48
Score0.846
Seed1
Au0.412
Energy-20.9
Binding len20
Me-7.308
Phylopstem6.890068571428571
Phylopflank4.080963118055556
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end2
Position5UTR
2D Structure