Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTTCGGGCCGCAGTTCAAT
(((.((((((((((..(((.(&).)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153427
GeneSymbolPITX2
Binding site565,586
Score0.846
Seed0
Au0.426
Energy-19.7
Binding len21
Me-7.938
Phylopstem0.39401390000000003
Phylopflank1.5849085400000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure