Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACGTTTGATGCTGGGTC
(((((((((..((((((.....&))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001349008
GeneSymbolCC2D2B
Binding site4961,4979
Score0.846
Seed1
Au0.559
Energy-16.6
Binding len18
Me-8.005
Phylopstem0.21595022222222215
Phylopflank0.2303036175
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure