Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGTTCCCCGCATAGGTGGCTGCAGA
((((((((((...(((..((.&.))..)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153446
GeneSymbolB4GALNT2
Binding site185,213
Score0.846
Seed1
Au0.368
Energy-19.8
Binding len22
Me-11.398
Phylopstem0.17910589999999993
Phylopflank-0.5734843387499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure