Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCCTTGTTGGCCAGGC
.((((((..((((.(((((...&))))).))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153451
GeneSymbolLTO1
Binding site2068,2087
Score0.923
Seed1
Au0.529
Energy-20.5
Binding len19
Me-8.02
Phylopstem4.3468665
Phylopflank2.517212324999999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure