Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCGGGTCTGCTACGGCACCGCGGGGCTGCAGAAACCCGGGGGCCAA
...((((((((((((((((((.&)))))..........................)))))....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153451
GeneSymbolLTO1
Binding site46,95
Score0.846
Seed0
Au0.279
Energy-21.2
Binding len49
Me-6.515
Phylopstem0.2531122166666668
Phylopflank-0.1282540081944445
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure