Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAAGCTGCCGGCTGCAGG
((((((((((((((...((((&)))).)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153451
GeneSymbolLTO1
Binding site1788,1809
Score0.833
Seed1
Au0.368
Energy-23.3
Binding len21
Me-4.906
Phylopstem0.17239656
Phylopflank-0.03906827375000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure