Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGAACTGAATTCCATGGGTT&CCCAGGGGTTCTATGACCCTATTGACTCCTACAGTTCTTT
.((((((((((((((.((((..&))))))))))).....................))))))).
Details
MiRNAhsa-miR-146a-5p
RefseqIDNM_153456
GeneSymbolHS6ST3
Binding site5189,5229
Score0.808
Seed1
Au0.515
Energy-18.3
Binding len40
Me-4.026
Phylopstem-0.4440730085714287
Phylopflank-0.10916474999999999
Longest consecutive pairings11
Position of longest consecutive pairings29
Pairings in 3prime end5
Position3UTR
2D Structure