Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGATGGAGGTGGAGCTGCAC
.(((((((.((.((.((.((.&))...)).)).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153478
GeneSymbolCSAG1
Binding site38,60
Score0.846
Seed1
Au0.397
Energy-18.0
Binding len22
Me-8.932
Phylopstem0.24258242857142862
Phylopflank-0.26026477500000006
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure