Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTACATCTGCCGCAGCCCTGCAGG
(((((((((((((((((((((&)))).))))...))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153485
GeneSymbolNUP155
Binding site162,190
Score0.846
Seed1
Au0.368
Energy-26.2
Binding len28
Me-3.938
Phylopstem0.19695748148148157
Phylopflank0.211461695
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure