Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGCCACCTCCCGATGCCTCCAGAGTCAGTGGGAAGGAGTCAGC
..((((((((((((((((((..&.)))))...........))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153498
GeneSymbolCAMK1D
Binding site6848,6895
Score0.923
Seed1
Au0.353
Energy-24.1
Binding len31
Me-4.957
Phylopstem0.2436957406896551
Phylopflank0.047896292749999986
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure