Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGGAGGGACCGCGGCCGCGGCGGCGGC
((((.(((((((((((..(((&.)))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153498
GeneSymbolCAMK1D
Binding site91,122
Score0.923
Seed0
Au0.324
Energy-25.7
Binding len21
Me-8.057
Phylopstem0.7168503363636364
Phylopflank0.9630182249999999
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure