Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTGCCGCAGCTTCAGC
(((.(((((((((.((..(((&))))).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153498
GeneSymbolCAMK1D
Binding site6130,6150
Score0.923
Seed0
Au0.412
Energy-21.8
Binding len20
Me-7.826
Phylopstem-0.43785817777777775
Phylopflank-0.60361410725
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure