Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATTGAGCCCCTTGTTGACACTTGGGGCTGCGGA
((((((((.((((((((((((&)))))))..))))..............).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153499
GeneSymbolCAMKK2
Binding site4560,4598
Score0.923
Seed1
Au0.412
Energy-20.9
Binding len38
Me-4.994
Phylopstem3.5882463571428573
Phylopflank1.18211223125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure