Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAGCTGGAAGCTGCAAAGGAGCCCAGA
..(((((((((((((((((...&))))))).............)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153606
GeneSymbolGARIN4
Binding site2194,2226
Score0.846
Seed1
Au0.471
Energy-24.3
Binding len32
Me-4.957
Phylopstem0.28482573548387097
Phylopflank0.22659912749999997
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure