Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCATTAGCAGAGGCAGA
((((..((((...((((((((&))))))))...))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349018
GeneSymbolNME9
Binding site700,722
Score0.846
Seed0
Au0.485
Energy-20.4
Binding len22
Me-17.418
Phylopstem0.07650155000000003
Phylopflank0.42913407374999996
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure