Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTTATTCCCCAGCTGCAGC
(((((((((.((..(((((.(&).)))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153610
GeneSymbolCMYA5
Binding site1988,2009
Score0.897
Seed1
Au0.5
Energy-21.3
Binding len21
Me-7.326
Phylopstem0.06507611111111114
Phylopflank0.45661120124999993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure