Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCCGCAGAGCGGCTGCGGT
((((((((((..((((..((.&))..)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153612
GeneSymbolHS3ST5
Binding site383,403
Score0.846
Seed1
Au0.265
Energy-21.1
Binding len20
Me-10.109
Phylopstem1.03524484
Phylopflank0.795585660625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure