Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATGACGACCGCGGCTAGGTCGCGGCAGA
((((((((((((((((..((.&))...))))))))))))........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349021
GeneSymbolNME9
Binding site1,31
Score0.846
Seed1
Au0.3
Energy-23.4
Binding len30
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end5
Position5UTR
2D Structure