Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCGTTCGCAGTGGCT
..((.(((((((.((..((((&))))..)).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349021
GeneSymbolNME9
Binding site67,87
Score0.846
Seed0
Au0.485
Energy-20.5
Binding len20
Me-10.598
Phylopstem0.2283654571428571
Phylopflank0.030566729999999993
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure