Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACTGCCAGCTAGCC
..((((((((((((...((((&)))))))))).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153614
GeneSymbolDNAJB13
Binding site21,40
Score0.846
Seed1
Au0.426
Energy-17.9
Binding len19
Me-5.925
Phylopstem-0.14551628571428574
Phylopflank1.0018642331250003
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure