Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGATGAGGAAGCTGCTCACAAATCTGCCTGCAGCTGCAGT
((((((((((((..((.((((&.)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153615
GeneSymbolRGL4
Binding site1012,1056
Score0.981
Seed1
Au0.441
Energy-22.5
Binding len20
Me-6.084
Phylopstem-0.9767247499999999
Phylopflank-0.16646689749999993
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure