Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGAGGACATGTTGCAGA
.....(((((((((((((.((&))))))))....))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_153619
GeneSymbolSEMA6D
Binding site5263,5283
Score1.0
Seed0
Au0.588
Energy-21.1
Binding len20
Me-13.666
Phylopstem1.1737149411764705
Phylopflank0.9945918024999999
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure