Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCATCCAGATTGGGTGCCAGC
..((((((((..(((((((.((&)))))))))..))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153620
GeneSymbolHOXA1
Binding site1088,1109
Score0.923
Seed1
Au0.471
Energy-23.9
Binding len21
Me-11.129
Phylopstem0.3216214222222222
Phylopflank0.5289412412499999
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure