Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCTCAGAGGGTAGCCT
....((((.(((((((((((..&)))).))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153620
GeneSymbolHOXA1
Binding site1547,1565
Score0.923
Seed0
Au0.559
Energy-21.1
Binding len18
Me-10.603
Phylopstem2.4331346666666667
Phylopflank4.0565168074999995
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure