Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGAGAAGGAGGGTCTC
(((((((....(((((.(((.&))).)))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_153620
GeneSymbolHOXA1
Binding site744,761
Score0.923
Seed1
Au0.397
Energy-20.3
Binding len17
Me-11.375
Phylopstem0.9436115428571428
Phylopflank1.23603213625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure