Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCAGTCTCCAAGTCGCAGCCCCGTGCCCCCCGGAGCCGGTGG
((((((((((.....(((((..&.)))))...)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153631
GeneSymbolHOXA3
Binding site1569,1613
Score0.923
Seed1
Au0.368
Energy-26.4
Binding len20
Me-12.991
Phylopstem4.190948000000001
Phylopflank5.859721012500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure