Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTCCCAATATGGACAGCCGCTACAACAGCACTGCGGG
((((((.(((.((((((.(((&.)))..)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153634
GeneSymbolCPNE8
Binding site44,86
Score0.923
Seed0
Au0.397
Energy-21.5
Binding len23
Me-8.306
Phylopstem0.26318991666666663
Phylopflank0.3302875462500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure