Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTAGACTGCAGTTGG
...(((((((((((..((...&))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153634
GeneSymbolCPNE8
Binding site2454,2470
Score1.0
Seed0
Au0.691
Energy-17.7
Binding len16
Me-7.483
Phylopstem5.508206181818182
Phylopflank4.704736024999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure