Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAGTCTGCAAGCCTGCT
..((((((((((((((.((((&)))).)))).))))).)).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153635
GeneSymbolCPNE9
Binding site1844,1867
Score0.923
Seed1
Au0.485
Energy-20.7
Binding len23
Me-4.957
Phylopstem0.3889372282352941
Phylopflank0.4784594524999999
Longest consecutive pairings5
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure