Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCCTTTAACTTTAGACCGCAGTA
.....(((((((((.((((((&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153645
GeneSymbolNUP50
Binding site2678,2706
Score1.0
Seed0
Au0.721
Energy-19.4
Binding len17
Me-14.401
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure