Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCAGCCGCCAGCAGGGAATAGTTGCT
..((((((((((((((..(((&)))..))))))))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153648
GeneSymbolSLC24A4
Binding site8955,8986
Score0.846
Seed1
Au0.456
Energy-22.8
Binding len31
Me-4.957
Phylopstem0.43843802
Phylopflank-0.33983447875
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end6
Position3UTR
2D Structure