Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAACAGACCTAAGCAGCTGA
...((((((((((((((((((&)))))).))).))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153648
GeneSymbolSLC24A4
Binding site5344,5368
Score0.923
Seed0
Au0.426
Energy-21.9
Binding len24
Me-6.515
Phylopstem-0.08065483478260871
Phylopflank0.03847782375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure