Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAACCGTCGGCCGCT
..((.((((((((((..((((&))))..)))))).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153675
GeneSymbolFOXA2
Binding site14,35
Score0.923
Seed0
Au0.328
Energy-23.4
Binding len21
Me-9.309
Phylopstem0.5201918181818181
Phylopflank-0.07957746899999997
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end6
Position5UTR
2D Structure