Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGCCGCGCCCGCGACCCCAAGACCTACAGGCGCAGCTACACGCAC
.((((((((((.((((.((((&.)))))))).)))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153675
GeneSymbolFOXA2
Binding site638,688
Score0.846
Seed1
Au0.353
Energy-24.3
Binding len25
Me-7.14
Phylopstem0.15359712142857143
Phylopflank-0.29642096124999995
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure