Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCGCAGGAATTCTAACAGGAGTGGGTGA
((((.(((((((((((.((((.&)))).)))))........)))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349077
GeneSymbolTBC1D5
Binding site4080,4110
Score0.846
Seed0
Au0.426
Energy-26.7
Binding len30
Me-8.057
Phylopstem1.3989446578947367
Phylopflank1.4871556187500004
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure