Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCCAGAAGGCAGCAGAGG
..((.(((.((((((((((((.&)))))))))))).)))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153676
GeneSymbolUSH1C
Binding site1142,1163
Score0.923
Seed0
Au0.529
Energy-23.2
Binding len21
Me-10.132
Phylopstem1.1305635499999998
Phylopflank2.2570275137499998
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure