Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCACAGCCCCCATCCCACTGAGGGTGGGGCAGCTGTGGG
((((((((((((((((..(((&)))...))))))....................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153685
GeneSymbolPIANP
Binding site1135,1178
Score0.846
Seed1
Au0.265
Energy-22.2
Binding len43
Me-3.938
Phylopstem0.7221089722222223
Phylopflank1.0065626412500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure