Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGTGGAGCGCAGCCGCAGCGCGC
.(((.(((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153690
GeneSymbolFAM43A
Binding site1660,1686
Score0.846
Seed0
Au0.324
Energy-24.2
Binding len16
Me-7.912
Phylopstem3.989313272727273
Phylopflank4.18333296875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure