Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCTCCAGAATGGGGCCCGTT
.((.((((((.(((((((((..&))).)))))).)))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153692
GeneSymbolHTRA4
Binding site721,742
Score0.846
Seed0
Au0.5
Energy-24.6
Binding len21
Me-9.65
Phylopstem3.3745039000000006
Phylopflank3.543980745
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure