Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGGAAATCTGGGAAGCCGTCTGTGG
((((((((((((((((((....&))))))).....)))).))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_153694
GeneSymbolSYCP3
Binding site149,177
Score1.0
Seed1
Au0.574
Energy-18.9
Binding len28
Me-3.938
Phylopstem0.664375362962963
Phylopflank0.4077155949999999
Longest consecutive pairings7
Position of longest consecutive pairings21
Pairings in 3prime end4
PositionCDS
2D Structure