Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTCAGCCTGCCAGACCGCAGCACTGCTGCAGA
((((((((((((((...((((&.))))....))))))))).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153700
GeneSymbolSTRC
Binding site3340,3376
Score0.846
Seed1
Au0.471
Energy-25.7
Binding len29
Me-4.906
Phylopstem0.3350391426315789
Phylopflank2.135264970375
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure