Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATATTGAATAGGTGAAAGATAACTGTAGTCAGGTG
(((((((((((((((((((...&))))))))).................))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_153705
GeneSymbolPOGLUT3
Binding site2627,2665
Score0.923
Seed1
Au0.691
Energy-16.9
Binding len38
Me-3.938
Phylopstem0.12707617567567572
Phylopflank0.25140230375
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end5
Position3UTR
2D Structure