Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCGTGCCCCAAGACAGGTGGTTGGGGTCTAGGAGTCGGCTGCAGCTGGCGAT
(((((((((((((((......&.)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_153707
GeneSymbolSAXO1
Binding site207,265
Score0.981
Seed1
Au0.353
Energy-22.1
Binding len18
Me-4.171
Phylopstem0.41150415625000003
Phylopflank0.5118059750000001
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end2
Position5UTR
2D Structure